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Tuesday, 08/03/2010
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Tandem Mass Spectrometry Data Analysis to Map Signaling Pathways and Protein Interaction Network
Yan Zhang, University of Michigan; Hye Kyong Kweon, University of Michigan; Philip Andrews, University of Michigan
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Quantifying Output from Protein Mass Spectrometry Experiments: An Overview
Tim Randolph, Fred Hutchinson Cancer Research Center
8:35 AM
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Constrained Smoothing of Scatterplots with Applications to Mass Spectrometry Data
Xingdong Feng, National Institute of Statistical Sciences; Nell Sedransk, National Institute of Statistical Sciences
8:50 AM
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Normalization and Missing Value Imputation for Proteomics Analysis
Yuliya V. Karpievitch, Pacific Northwest National Laboratory
8:55 AM
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Mixed-Effect Models for High-Throughput Mass Spectrometry-Based Proteomic Profiling Experiments
Timothy Clough, Purdue University; Ching-Yun (Veavi) Chang, Purdue University; Olga Vitek, Purdue University
9:15 AM
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Change-Point Modeling for Concentration and CV in Multiple Reaction Monitoring: Mass Spectrometry Assays
Steven James Skates, Massachusetts General Hospital
9:15 AM
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Statistical Methods for Ion Mobility Spectrometry: A New Dimension for Proteomics
Jeffrey R. Stanley, Texas A&M University
9:35 AM
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A Nested Mixture Model for Protein Identification Using Mass Spectrometry
Qunhua Li, University of California, Berkeley; Michael MacCoss, University of Washington; Matthew Stephens, The University of Chicago
9:35 AM
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Fuzzy Clustering and Bayesian Model Selection for Peptide/Protein Identification
Soyoung Ryu, University of Washington; Vladimir Minin, University of Washington; Dave Goodlett, University of Washington
11:05 AM
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Wednesday, 08/04/2010
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Analysis of Data from Proteomics Study Utilizing SILAC (Stable Isotopic Labeling of Amino Acids in Cell Culture)
Qinghua Song, Merck & Co., Inc.; Daniel Spellman, Merck & Co., Inc.; Ronald Miller, Merck & Co., Inc.; Andy Liaw, Merck & Co., Inc.
2:05 PM
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The Number of the Nearest Neighboring Sites in the Local Maximum Algorithm for Identifying Peaks in Mass Spectrometry Data Analysis
Zhiying You, The University of Alabama at Birmingham; Andrzej Kulczycki , The University of Alabama at Birmingham; Sreelatha Meleth , The University of Alabama at Birmingham; Denise Oelschlager , The University of Alabama at Birmingham; William Grizzle , The University of Alabama at Birmingham
2:20 PM
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A Statistical Protocol for Protein Quantitation in Bottom-Up MS-Based Proteomics
Xuan Wang, Texas A&M University
2:50 PM
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Predicting Patient Survival from Proteomic Profile Using MALDI-TOF Mass Spectrometry Data
Farida Mostajabi, University of Louisville; Susmita Datta, University of Louisville
3:35 PM
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